Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917123.1_cds_XP_016466780.1_59598
CDS Infomation

[gene=LOC107789474] [db_xref=GeneID:107789474] [protein=protein argonaute 1-like] [protein_id=XP_016466780.1] [location=join(80158..80637,80747..80955,81034..81183,81308..81441,81562..81671,81856..81962,82136..82274,82355..82471,83308..83415,83575..83646,83896..84018,84102..84267,84350..84609,84687..84829,85013..85075,85143..85206,85337..85472,85554..85627,85711..85805,85896..85927,86064..86290)] [gbkey=CDS]
Sequence

ATGGTCCCTCAACAGTCATATGGCGGACAACCTGAATACTATCAGCAGGGCAGGGGGACT
CAGCAGCATCAACGAGGCGGAGGACCACCCCAGCAACATGGTGGCATAGGTGGCCGTGGG
GCACCTTCCGGTGGGCCTTCTAGGCCACCAGCACCCGAGCTGCACCAAGCTACCTCCCAG
ACTCCATATCAAGCTGCAATGACTACTCAGCCTATACCTTATGTAAGACCAACTGAAACA
TCCTCGGAAGCTGGTTCCTCATCTCAGCCACCTGAGCAGGCAGCTCTACAAGTGACACAA
CAGTTCCAGCAACTTGCTGTGCAGCAAGAAGCTGCTCCAACGCAAGCAGTACCACCTGCA
TCAAGCAAATCACTAAGGTTTCCCCTGCGCCCAGGGAAGGGGAGCACTGGTATGAGATGC
ATTGTCAAAGCCAATCACTTCTTCGCAGAGCTGCCTGACAAAGACTTGCACCAGTATGAT
GTCACAATTTCTCCAGAGGTGCCGTCACGTGGCGTCAACCGTGCTGTCATGGCACAGCTG
GTGAAGCTGTACCGAGAATCTCATCTTGGGAAGAGACTTCCAGCATATGATGGAAGGAAA
AGTCTATACACTGCAGGGCCCCTTCCATTTGTTCAAAAAGACTTTAAAATAACTCTTATT
GATGATGAGGATGGGCCTGGTGGTGCTAGGAGGGAAAGGGAATTTAAAGTTGTGATCAAA
TTGGCTGGCCGTGCTGATCTTCATCACTTGGGAATGTTTTTAGAAGGGAGGCAGGCCGAT
GCACCTCAAGAGGCGCTTCAAGTTCTGGATATTGTTCTGCGTGAGTTGCCAACATCTAGG
TTTTGTCCTGTGGGCCGTTCTTTCTATTCCCCTGATTTAGGGCGAAGGCAACCATTGGGT
GACGGTTTAGAGAGTTGGCGTGGGTTCTATCAAAGCATTCGCCCTACACAAATGGGCTTA
TCACTAAACATCGATATGTCTTCCACTGCCTTCTTTGAGCCACTGCCAGTCATTGATTTT
GTGACACAGCTTCTGAATCGAGATGTGTCATCTAGACCACTGTCTGATGCTGACCGTGTA
AAAATCAAAAAAGCACTGAGAGGGGTGAAGGTGGAGGTTACTCATCGTGGAAATATGCGG
AGGAAGTACCGCATTTCGGGTTTAACATCTCAAGCAACACGAGAGTTAACTTTCCCTGTT
GATGAAAATGGTACAGTGAAATCTGTAATTGAATATTTTCGAGAAACATATGGGTTTGTA
ATTCAGCATACCCAGTGGCCTTGTCTACAAGTTGGAAATCAGCAGAGACCTAATTACTTG
CCAATGGAAGTCTGCAAGATTGTGGAGGGACAAAGGTATTCAAAGCGCTTGAATGAGAGA
CAGATCACTGCACTTCTGAAAGTGACCTGTCAGCGTCCCCAAGAGAGGGAGCGCGATATT
CTTGAGACTGTACGTCATAACGCCTATGCTAATGACCCATATGCCAAGGAGTTTGGTATT
AAGATTAGTGACAAGTTGGCACAAGTTGAGGCTCGTATTTTGCCTCCACCTCGGCTTAAA
TATCATGATAACGGTCGGGAAAAAGACTGCCTGCCACAAGTTGGCCAATGGAATATGATG
AATAAGAAAATGGTAAATGGAGGAACAGTTAACAATTGGATCTGCATAAACTTTTCTCGC
AATGTGCAAGACAGTGTTGCTCATGGGTTTTGTTCTGAGCTTGCACAAATGTGCCAGATA
TCTGGCATGAATTTCAATCCAAATCCTGTTCTGCCACCTTCGAGTGCACGCCCTGATCAG
GTCGAAAGAGCCTTGAAAACTCGATTTCATGATGCTATGACTAAGTTGCAGCCGCATGGG
AGAGAGCTTGATCTGCTAGTTGTCATCTTGCCAGACAATAATGGATCTCTTTATGGTGAT
CTGAAGCGAATTTGTGAGACTGAACTAGGAGTTGTCTCACAGTGCTGTTTGACAAAACAT
GTATTTAAGATGAGCAAACAGTATCTAGCCAATGTAGCGCTGAAAATCAATGTGAAGGTG
GGAGGGAGAAACACTGTGCTTGTTGATGCAATATCGAGGCGAATTCCCCTTGTCAGCGAC
CGGCCTACCATCATTTTTGGTGCGGATGTCACCCACCCTCACCCTGGGGAGGATTCTAGC
CCATCCATTGCCGCGGTGGTTGCTTCTCAAGATTGGCCTGAGATTACAAAGTATGCTGGT
CTAGTTTCTGCTCAAGCCCATAGGCAAGAGCTTATTCAGGATCTGTACACGACTAGGCAA
GATCCTGTTAAGGGGACAGTGGCTGGTGGCATGATTAAGGACTTACTTATATCCTTCCGA
AGAGCTACTGGACAAAAGCCTCAGAGAATCATTTTCTACAGGGATGGCGTCAGTGAAGGA
CAATTTTATCAAGTGCTTCTTTTCGAACTTGATGCGATCCGCAAAGCATGTGCGTCTTTG
GAGCCAAATTATCAGCCCCCAGTTACATTTGTTGTGGTTCAGAAACGACATCACACAAGA
CTTTTTGCCAATAACCACCGTGACAGAAATGCCGTTGACAGGAGCGGGAACATTATACCC
GGTACTGTTGTGGATTCAAAGATATGCCACCCGACAGAGTTTGATTTCTATCTTTGTAGC
CATGCTGGCATACAGGGTACGAGCCGTCCGGCTCACTACCATGTTCTATGGGACGAGAAC
AAATTCACAGCCGATGCGCTGCAGTCTTTGACCAACAACCTCTGCTATACATATGCAAGG
TGCACACGTTCCGTCTCCATCGTTCCCCCTGCATATTATGCGCATTTGGCAGCTTTCCGT
GCTCGATTTTATATGGAGCCTGAGACATCTGACGGCGGTTCAGTAACAAGTGGGGCTGCT
GCTGGCAGAGGGGGTGGTGCAGGGGTTGCTGGAAGGAACACCCGAGCCCCAGGTGCTGGT
GTTGGTGCTGCTGTTAGACCTCTTCCTGCGCTCAAGGATAATGTGAAGAGGGTTATGTTC
TATTGCTAG

Peptide Sequence

PEP ID

XP_016466780.1
PEP Infomation

PREDICTED: protein argonaute 1-like [Nicotiana tabacum]
Sequence

MVPQQSYGGQPEYYQQGRGTQQHQRGGGPPQQHGGIGGRGAPSGGPSRPPAPELHQATSQ
TPYQAAMTTQPIPYVRPTETSSEAGSSSQPPEQAALQVTQQFQQLAVQQEAAPTQAVPPA
SSKSLRFPLRPGKGSTGMRCIVKANHFFAELPDKDLHQYDVTISPEVPSRGVNRAVMAQL
VKLYRESHLGKRLPAYDGRKSLYTAGPLPFVQKDFKITLIDDEDGPGGARREREFKVVIK
LAGRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSRFCPVGRSFYSPDLGRRQPLG
DGLESWRGFYQSIRPTQMGLSLNIDMSSTAFFEPLPVIDFVTQLLNRDVSSRPLSDADRV
KIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDENGTVKSVIEYFRETYGFV
IQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQERERDI
LETVRHNAYANDPYAKEFGIKISDKLAQVEARILPPPRLKYHDNGREKDCLPQVGQWNMM
NKKMVNGGTVNNWICINFSRNVQDSVAHGFCSELAQMCQISGMNFNPNPVLPPSSARPDQ
VERALKTRFHDAMTKLQPHGRELDLLVVILPDNNGSLYGDLKRICETELGVVSQCCLTKH
VFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSS
PSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLYTTRQDPVKGTVAGGMIKDLLISFR
RATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTR
LFANNHRDRNAVDRSGNIIPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
KFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDGGSVTSGAA
AGRGGGAGVAGRNTRAPGAGVGAAVRPLPALKDNVKRVMFYC

Transcript Sequence

Gene sequence data has not been registered.